Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.96□□□□□ -1.3
Clk1P22518 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 Gm7369-201ENSMUST00000192738 936 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.96□□□□□ -1.3
Clk1P22518 Gm42977-201ENSMUST00000197497 144 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Gm32842-201ENSMUST00000212653 738 ntBASIC6.96□□□□□ -1.3
Clk1P22518 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clk1P22518 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.96□□□□□ -1.3
Clk1P22518 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Gm9801-201ENSMUST00000054860 408 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clk1P22518 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.96□□□□□ -1.3
Clk1P22518 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Clk1P22518 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clk1P22518 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Clk1P22518 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm22022-201ENSMUST00000104355 127 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm5761-201ENSMUST00000119238 834 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm14450-201ENSMUST00000119984 240 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm13495-201ENSMUST00000121156 537 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.95□□□□□ -1.3
Clk1P22518 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 Gm22562-201ENSMUST00000157334 111 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.95□□□□□ -1.3
Clk1P22518 Gm2951-201ENSMUST00000169447 490 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.95□□□□□ -1.3
Clk1P22518 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm43390-201ENSMUST00000196614 421 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm40319-201ENSMUST00000199785 481 ntBASIC6.95□□□□□ -1.3
Clk1P22518 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.95□□□□□ -1.3
Clk1P22518 AC161374.2-201ENSMUST00000223662 596 ntBASIC6.95□□□□□ -1.3
Clk1P22518 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.95□□□□□ -1.3
Clk1P22518 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Clk1P22518 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Clk1P22518 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.95□□□□□ -1.3
Clk1P22518 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Clk1P22518 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.94□□□□□ -1.3
Clk1P22518 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Clk1P22518 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clk1P22518 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clk1P22518 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.94□□□□□ -1.3
Clk1P22518 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Clk1P22518 Gm25167-201ENSMUST00000104188 120 ntBASIC6.94□□□□□ -1.3
Clk1P22518 Gm12599-201ENSMUST00000120534 792 ntBASIC6.94□□□□□ -1.3
Clk1P22518 Gm13828-201ENSMUST00000122278 363 ntBASIC6.94□□□□□ -1.3
Clk1P22518 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clk1P22518 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.94□□□□□ -1.3
Clk1P22518 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Clk1P22518 Mir1932-201ENSMUST00000157390 90 ntBASIC6.94□□□□□ -1.3
Clk1P22518 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms