Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxd3P09027 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Hoxd3P09027 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxd3P09027 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxd3P09027 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxd3P09027 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hoxd3P09027 Apol10b-201ENSMUST00000089465 1986 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Dazap2-201ENSMUST00000000356 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm44610-201ENSMUST00000209012 3827 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 AC127596.1-201ENSMUST00000214721 2415 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Rprd1b-201ENSMUST00000029180 4283 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 AC113059.1-201ENSMUST00000181185 2777 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Dync1i2-203ENSMUST00000112136 2548 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Stau2-207ENSMUST00000131257 3616 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm37522-201ENSMUST00000195437 2884 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Pld1-203ENSMUST00000123539 3732 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm26209-201ENSMUST00000103852 110 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm22452-201ENSMUST00000122804 104 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm15179-202ENSMUST00000152799 671 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm23598-201ENSMUST00000157262 144 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm22587-201ENSMUST00000157511 298 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Pabpn1-208ENSMUST00000172557 700 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Hoxd3P09027 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm27036-201ENSMUST00000182465 980 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm17800-201ENSMUST00000182466 971 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29272-201ENSMUST00000185476 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29550-201ENSMUST00000185543 285 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21919-201ENSMUST00000185653 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29120-201ENSMUST00000186111 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28680-201ENSMUST00000186743 480 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21824-201ENSMUST00000186810 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21862-201ENSMUST00000186957 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21796-201ENSMUST00000187116 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21840-201ENSMUST00000187212 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29420-201ENSMUST00000187261 694 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21795-201ENSMUST00000187263 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28814-201ENSMUST00000187334 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21720-201ENSMUST00000187428 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21848-201ENSMUST00000187722 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm20827-201ENSMUST00000187928 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21766-201ENSMUST00000187962 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21837-201ENSMUST00000188117 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29623-201ENSMUST00000188316 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21829-201ENSMUST00000188787 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21892-201ENSMUST00000189182 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21777-201ENSMUST00000189307 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28247-201ENSMUST00000189329 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28350-201ENSMUST00000189453 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21906-201ENSMUST00000189760 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm5696-201ENSMUST00000189850 552 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29411-201ENSMUST00000189889 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21717-201ENSMUST00000189902 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21765-201ENSMUST00000189913 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21841-201ENSMUST00000189958 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21895-201ENSMUST00000189997 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21734-201ENSMUST00000190346 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21902-201ENSMUST00000190361 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29029-201ENSMUST00000190520 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21898-201ENSMUST00000190727 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm29300-201ENSMUST00000190738 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm20793-201ENSMUST00000190779 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28879-201ENSMUST00000190973 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21752-201ENSMUST00000191023 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21757-201ENSMUST00000191075 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28946-201ENSMUST00000191176 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm28841-201ENSMUST00000191284 695 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21813-201ENSMUST00000191291 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21878-201ENSMUST00000191365 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21855-201ENSMUST00000191596 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm20833-201ENSMUST00000192708 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21907-201ENSMUST00000192989 696 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms