Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.49□□□□□ -1.37
P06344 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Gm2089-201ENSMUST00000218294 479 ntBASIC6.49□□□□□ -1.37
P06344 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.49□□□□□ -1.37
P06344 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.49□□□□□ -1.37
P06344 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
P06344 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Gm22865-201ENSMUST00000083949 214 ntBASIC6.49□□□□□ -1.37
P06344 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
P06344 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.49□□□□□ -1.37
P06344 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.49□□□□□ -1.37
P06344 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
P06344 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.49□□□□□ -1.37
P06344 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
P06344 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
P06344 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P06344 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.48□□□□□ -1.37
P06344 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.48□□□□□ -1.37
P06344 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.48□□□□□ -1.37
P06344 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
P06344 Klf5-202ENSMUST00000226784 2852 ntBASIC6.48□□□□□ -1.37
P06344 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P06344 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.48□□□□□ -1.37
P06344 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.48□□□□□ -1.37
P06344 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
P06344 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.48□□□□□ -1.37
P06344 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.48□□□□□ -1.37
P06344 Gm13744-201ENSMUST00000118953 850 ntBASIC6.48□□□□□ -1.37
P06344 Gm13545-201ENSMUST00000119044 482 ntBASIC6.48□□□□□ -1.37
P06344 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.48□□□□□ -1.37
P06344 Gm11263-201ENSMUST00000121853 749 ntBASIC6.48□□□□□ -1.37
P06344 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm22795-201ENSMUST00000157233 118 ntBASIC6.48□□□□□ -1.37
P06344 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.48□□□□□ -1.37
P06344 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
P06344 Gm26179-201ENSMUST00000177723 132 ntBASIC6.48□□□□□ -1.37
P06344 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.48□□□□□ -1.37
P06344 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Pea15b-201ENSMUST00000182806 387 ntBASIC6.48□□□□□ -1.37
P06344 Gm18501-201ENSMUST00000185363 664 ntBASIC6.48□□□□□ -1.37
P06344 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm29496-201ENSMUST00000189854 693 ntBASIC6.48□□□□□ -1.37
P06344 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P06344 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm36928-201ENSMUST00000192466 694 ntBASIC6.48□□□□□ -1.37
P06344 Gm37325-201ENSMUST00000194971 694 ntBASIC6.48□□□□□ -1.37
P06344 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.48□□□□□ -1.37
P06344 Gm7285-201ENSMUST00000198801 580 ntBASIC6.48□□□□□ -1.37
P06344 Gm42804-201ENSMUST00000199701 178 ntBASIC6.48□□□□□ -1.37
P06344 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.48□□□□□ -1.37
P06344 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.48□□□□□ -1.37
P06344 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.48□□□□□ -1.37
P06344 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.48□□□□□ -1.37
P06344 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.48□□□□□ -1.37
P06344 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.48□□□□□ -1.37
P06344 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.48□□□□□ -1.37
P06344 Gm25189-201ENSMUST00000083911 164 ntBASIC6.48□□□□□ -1.37
P06344 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.48□□□□□ -1.37
P06344 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P06344 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P06344 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P06344 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.47□□□□□ -1.37
P06344 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
P06344 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.47□□□□□ -1.37
P06344 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms