Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm8089-201ENSMUST00000122463 968 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Mir1929-201ENSMUST00000158635 93 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm20128-201ENSMUST00000196189 417 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm5711-201ENSMUST00000197896 421 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm3511-201ENSMUST00000199823 204 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm44279-201ENSMUST00000205154 472 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm15310-201ENSMUST00000117891 372 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm12573-201ENSMUST00000118158 286 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm20432-201ENSMUST00000173716 250 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm7452-201ENSMUST00000200764 788 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm44565-201ENSMUST00000208194 269 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Scn3aA2ASI5 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Scn3aA2ASI5 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Scn3aA2ASI5 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Scn3aA2ASI5 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.02□□□□□ -1.12
Scn3aA2ASI5 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm7613-201ENSMUST00000139070 487 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm25989-201ENSMUST00000158761 133 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm8550-201ENSMUST00000161621 653 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm25574-201ENSMUST00000175245 249 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm27804-201ENSMUST00000185135 119 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm37322-201ENSMUST00000193409 337 ntBASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.02□□□□□ -1.13
Scn3aA2ASI5 Gm46379-201ENSMUST00000222551 265 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms