Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm7129-201ENSMUST00000117402 997 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm13622-201ENSMUST00000120658 433 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm25164-201ENSMUST00000158908 116 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm20111-201ENSMUST00000184830 319 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm29435-201ENSMUST00000191310 689 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm32842-201ENSMUST00000212653 738 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm6491-201ENSMUST00000118273 990 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm25692-201ENSMUST00000175444 125 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm28006-201ENSMUST00000183841 122 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm28573-201ENSMUST00000187821 380 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm28145-201ENSMUST00000189742 380 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm28400-201ENSMUST00000191332 380 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm38063-201ENSMUST00000193990 342 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm43108-201ENSMUST00000200525 293 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm44380-201ENSMUST00000203125 293 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm5314-201ENSMUST00000204852 466 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm7986-201ENSMUST00000221336 551 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms