Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm25167-201ENSMUST00000104188 120 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm15186-201ENSMUST00000119345 563 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm23007-201ENSMUST00000158951 177 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm26197-201ENSMUST00000175033 115 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Mir199b-201ENSMUST00000175066 110 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm8304-201ENSMUST00000185744 584 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm18033-201ENSMUST00000186678 550 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm29273-201ENSMUST00000188880 262 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm43929-201ENSMUST00000203025 409 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm45756-201ENSMUST00000212491 407 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Olfr888-201ENSMUST00000075228 945 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Mmp1bQ9EPL6 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm24462-201ENSMUST00000102430 106 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm24071-201ENSMUST00000104520 132 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm5752-201ENSMUST00000117771 594 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm14645-201ENSMUST00000118597 417 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm12123-201ENSMUST00000120348 472 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm15928-201ENSMUST00000122455 280 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Mmp1bQ9EPL6 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms