Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm6630-201ENSMUST00000119199 454 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm14485-201ENSMUST00000119489 493 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Mir1983-201ENSMUST00000157523 132 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm22484-201ENSMUST00000157992 306 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm3611-201ENSMUST00000173687 877 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm29462-201ENSMUST00000191458 288 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm37322-201ENSMUST00000193409 337 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Trbv9-201ENSMUST00000194494 290 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm16020-201ENSMUST00000084281 210 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm10029-201ENSMUST00000089635 330 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sf3a3Q9D554 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.16□□□□□ -1.26
Sf3a3Q9D554 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Mir744-201ENSMUST00000103261 100 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm12106-201ENSMUST00000116006 1200 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm13674-201ENSMUST00000121276 823 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm12967-201ENSMUST00000122147 289 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm24063-201ENSMUST00000157491 105 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm18191-201ENSMUST00000174624 824 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm28413-201ENSMUST00000189369 291 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm8010-201ENSMUST00000194128 873 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm10416-201ENSMUST00000197379 645 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Zfp389-202ENSMUST00000224437 1234 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Gm13456-201ENSMUST00000118928 1365 ntBASIC7.15□□□□□ -1.26
Sf3a3Q9D554 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Sf3a3Q9D554 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Sf3a3Q9D554 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms