Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tcl1b2-202ENSMUST00000142230 851 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm24786-201ENSMUST00000157379 109 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm22388-201ENSMUST00000158194 248 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm8065-201ENSMUST00000164048 605 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm7083-201ENSMUST00000178617 450 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm8614-201ENSMUST00000182528 978 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm27913-201ENSMUST00000184473 173 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm29600-201ENSMUST00000188687 377 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm23377-202ENSMUST00000196828 138 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm7965-201ENSMUST00000211675 1105 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm7850-201ENSMUST00000212909 712 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC167017.1-201ENSMUST00000214975 412 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm46103-201ENSMUST00000217614 341 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC161117.2-201ENSMUST00000221908 451 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC124173.1-201ENSMUST00000223701 189 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC098742.1-201ENSMUST00000227945 373 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 AC107711.5-201ENSMUST00000228149 594 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm24146-201ENSMUST00000082760 321 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Cep19-201ENSMUST00000042869 1567 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm28791-201ENSMUST00000185888 1779 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm7203-201ENSMUST00000210880 1404 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Mir467f-201ENSMUST00000116923 120 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm15916-201ENSMUST00000118355 736 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm13501-201ENSMUST00000118477 979 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm6285-201ENSMUST00000122012 498 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm23441-201ENSMUST00000157268 127 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm23385-201ENSMUST00000158592 295 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm15664-201ENSMUST00000160167 184 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm5459-201ENSMUST00000171235 798 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm6931-202ENSMUST00000183137 1009 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Mir7669-201ENSMUST00000183442 58 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Mir6934-201ENSMUST00000183965 62 ntBASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim42Q9D2H5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms