Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Ccdc47Q9D024 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm24986-201ENSMUST00000104452 132 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm11880-201ENSMUST00000117612 399 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm25947-201ENSMUST00000180343 110 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm27019-201ENSMUST00000183056 404 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm42573-201ENSMUST00000202327 478 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ccdc47Q9D024 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Ccdc47Q9D024 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Ccdc47Q9D024 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Ccdc47Q9D024 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.52□□□□□ -1.04
Ccdc47Q9D024 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.52□□□□□ -1.04
Ccdc47Q9D024 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.52□□□□□ -1.04
Ccdc47Q9D024 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm15644-201ENSMUST00000121764 387 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm3103-201ENSMUST00000198073 752 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm46379-201ENSMUST00000222551 265 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm20900-201ENSMUST00000078729 472 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ccdc47Q9D024 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc47Q9D024 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms