Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm11848-201ENSMUST00000121207 973 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm4510-201ENSMUST00000218265 427 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm18592-201ENSMUST00000221529 276 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm12630-201ENSMUST00000121575 784 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm26509-201ENSMUST00000180947 948 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm2840-201ENSMUST00000048361 411 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 CT025645.1-201ENSMUST00000222760 4322 ntBASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Cdh23Q99PF4 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Mir6903-201ENSMUST00000183597 88 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm19212-201ENSMUST00000216642 862 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm8419-201ENSMUST00000189886 412 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm44943-201ENSMUST00000207254 300 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AC162934.2-201ENSMUST00000221451 249 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm22372-201ENSMUST00000104589 136 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm22312-201ENSMUST00000158005 130 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm28958-201ENSMUST00000185864 703 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Gm8256-203ENSMUST00000228692 591 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AW822073-201ENSMUST00000075305 555 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cdh23Q99PF4 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cdh23Q99PF4 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms