Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm29195-201ENSMUST00000189038 379 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm28377-201ENSMUST00000189695 720 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm8826-201ENSMUST00000193161 948 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm7151-201ENSMUST00000211511 954 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm18914-201ENSMUST00000214625 616 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm46191-201ENSMUST00000218899 433 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 AC102352.1-201ENSMUST00000224187 582 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.09□□□□□ -1.27
Clrn1Q8K445 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Clrn1Q8K445 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.28
Clrn1Q8K445 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.09□□□□□ -1.28
Clrn1Q8K445 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
Clrn1Q8K445 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.09□□□□□ -1.28
Clrn1Q8K445 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Clrn1Q8K445 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Clrn1Q8K445 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm28791-201ENSMUST00000185888 1779 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm7171-201ENSMUST00000177413 1349 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm12844-201ENSMUST00000119463 582 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm12731-201ENSMUST00000120932 268 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm14713-201ENSMUST00000122362 686 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm11188-201ENSMUST00000122382 388 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm23441-201ENSMUST00000157268 127 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm24738-201ENSMUST00000158856 123 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm26595-201ENSMUST00000181585 484 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm21181-201ENSMUST00000186249 330 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm21577-201ENSMUST00000190823 697 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm37392-201ENSMUST00000192098 516 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm7369-201ENSMUST00000192738 936 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm37845-201ENSMUST00000194977 355 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm43765-201ENSMUST00000196303 893 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm43542-201ENSMUST00000199505 379 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm44954-201ENSMUST00000208513 227 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm32842-201ENSMUST00000212653 738 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm9289-201ENSMUST00000221269 606 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.08□□□□□ -1.28
Clrn1Q8K445 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Clrn1Q8K445 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms