Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm16020-201ENSMUST00000084281 210 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm26016-201ENSMUST00000104403 129 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm14279-201ENSMUST00000117142 332 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm10243-201ENSMUST00000117571 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm6461-201ENSMUST00000120015 633 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm13366-201ENSMUST00000122198 970 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm22024-201ENSMUST00000122733 287 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm3208-201ENSMUST00000168281 427 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm23139-201ENSMUST00000179454 132 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm27018-201ENSMUST00000181136 225 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm27026-201ENSMUST00000183003 892 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm43235-201ENSMUST00000200121 297 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm45319-201ENSMUST00000210220 318 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm8667-201ENSMUST00000211112 449 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm36758-201ENSMUST00000222594 310 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AV026068-219ENSMUST00000224148 933 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm10247-201ENSMUST00000090395 333 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Brf1Q8CFK2 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.71□□□□□ -1.01
Brf1Q8CFK2 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Brf1Q8CFK2 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Brf1Q8CFK2 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.71□□□□□ -1.01
Brf1Q8CFK2 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Brf1Q8CFK2 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm14201-201ENSMUST00000117627 289 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm11926-201ENSMUST00000118520 430 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm15484-201ENSMUST00000118871 828 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Mir8094-201ENSMUST00000183361 117 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm5147-201ENSMUST00000185999 794 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm37322-201ENSMUST00000193409 337 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm43040-201ENSMUST00000202399 558 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm44258-201ENSMUST00000204925 301 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms