Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm13006-201ENSMUST00000118683 214 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm15362-201ENSMUST00000121459 388 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm26182-201ENSMUST00000157688 116 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm24130-201ENSMUST00000158536 151 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm3208-201ENSMUST00000168281 427 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm24923-201ENSMUST00000178201 88 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Mir8094-201ENSMUST00000183361 117 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm28573-201ENSMUST00000187821 380 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm28145-201ENSMUST00000189742 380 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm28400-201ENSMUST00000191332 380 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm29977-201ENSMUST00000206804 724 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm9800-201ENSMUST00000052615 336 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.42□□□□□ -1.22
Trub1Q8C0D0 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm7129-201ENSMUST00000117402 997 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm11865-201ENSMUST00000118093 859 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm20430-201ENSMUST00000172474 207 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Mir199b-201ENSMUST00000175066 110 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm27401-201ENSMUST00000184052 173 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm5147-201ENSMUST00000185999 794 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm8921-201ENSMUST00000204306 649 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm44833-201ENSMUST00000208368 331 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm44982-201ENSMUST00000208795 471 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trub1Q8C0D0 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms