Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm25396-201ENSMUST00000103981 133 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm24986-201ENSMUST00000104452 132 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm15779-201ENSMUST00000117470 412 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm13163-201ENSMUST00000119875 336 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm15574-201ENSMUST00000119937 405 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm11383-201ENSMUST00000121346 807 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm24551-201ENSMUST00000158645 92 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm4287-201ENSMUST00000174329 585 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm24576-201ENSMUST00000175508 248 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm28934-201ENSMUST00000186491 346 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm31306-201ENSMUST00000197517 508 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm6308-201ENSMUST00000203226 313 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm34701-201ENSMUST00000204213 849 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm44128-201ENSMUST00000204909 219 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm44743-201ENSMUST00000209062 386 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC192333.4-201ENSMUST00000224269 981 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC107663.3-201ENSMUST00000225873 601 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC167013.3-201ENSMUST00000228110 989 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC133654.1-201ENSMUST00000228411 672 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 AC079245.1-201ENSMUST00000215680 1454 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Prpf38bQ80SY5 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm37124-201ENSMUST00000192140 1992 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm23131-201ENSMUST00000104253 132 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm25276-201ENSMUST00000104300 124 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm2003-201ENSMUST00000118537 636 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm1989-201ENSMUST00000126244 636 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm24363-201ENSMUST00000158440 311 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm25713-201ENSMUST00000158625 109 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm11107-201ENSMUST00000165414 505 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm29142-201ENSMUST00000188009 696 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Gm28508-201ENSMUST00000188016 696 ntBASIC8.43□□□□□ -1.06
Prpf38bQ80SY5 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms