Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm13798-201ENSMUST00000118285 139 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm15153-201ENSMUST00000119867 274 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm15842-201ENSMUST00000120513 618 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm15188-201ENSMUST00000121264 704 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
CiitaP79621 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm7651-201ENSMUST00000173398 901 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm27782-201ENSMUST00000185059 199 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm38373-201ENSMUST00000192042 288 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm18469-201ENSMUST00000208850 439 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm9604-201ENSMUST00000211175 433 ntBASIC7.93□□□□□ -1.14
CiitaP79621 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.93□□□□□ -1.14
CiitaP79621 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CiitaP79621 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CiitaP79621 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
CiitaP79621 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CiitaP79621 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
CiitaP79621 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.92□□□□□ -1.14
CiitaP79621 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CiitaP79621 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.92□□□□□ -1.14
CiitaP79621 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.92□□□□□ -1.14
CiitaP79621 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 Gm17786-201ENSMUST00000182000 427 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.92□□□□□ -1.14
CiitaP79621 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.92□□□□□ -1.14
CiitaP79621 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.92□□□□□ -1.14
CiitaP79621 Gm9419-201ENSMUST00000200672 567 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm44722-201ENSMUST00000206473 436 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Gm44566-201ENSMUST00000207638 304 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Gm45497-201ENSMUST00000211701 740 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.92□□□□□ -1.14
CiitaP79621 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CiitaP79621 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CiitaP79621 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CiitaP79621 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CiitaP79621 Gm6166-201ENSMUST00000098689 409 ntBASIC7.92□□□□□ -1.14
CiitaP79621 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms