Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm38306-201ENSMUST00000193954 237 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm34272-201ENSMUST00000208886 253 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Hmgb1P63158 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 AC156031.1-201ENSMUST00000217288 2555 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 AC122408.2-201ENSMUST00000217901 1391 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm22150-201ENSMUST00000104447 135 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm14414-201ENSMUST00000120833 573 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm10012-202ENSMUST00000170379 372 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm9423-201ENSMUST00000183173 997 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm26980-201ENSMUST00000183321 395 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm29126-201ENSMUST00000188686 151 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm9723-201ENSMUST00000192100 457 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm18445-201ENSMUST00000195502 774 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm44451-201ENSMUST00000203767 483 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm45283-201ENSMUST00000210593 628 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm18629-201ENSMUST00000222496 884 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Arhgef33-207ENSMUST00000224966 490 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Hmgb1P63158 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 AU020206-202ENSMUST00000206358 3009 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Hmgb1P63158 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.36□□□□□ -1.07
Hmgb1P63158 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Hmgb1P63158 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm15062-201ENSMUST00000120567 367 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.35□□□□□ -1.07
Hmgb1P63158 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm22949-201ENSMUST00000158562 105 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms