Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.79□□□□□ -1.16
Shmt1P50431 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Shmt1P50431 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm13739-201ENSMUST00000118020 530 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm14787-201ENSMUST00000121236 388 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm8577-201ENSMUST00000122420 986 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm24442-201ENSMUST00000157238 327 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm26046-201ENSMUST00000157312 166 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm5611-201ENSMUST00000164523 852 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm22702-201ENSMUST00000175372 69 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm20690-201ENSMUST00000177341 315 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm28925-201ENSMUST00000188586 168 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm19035-202ENSMUST00000194575 959 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm37709-201ENSMUST00000195074 600 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm36932-201ENSMUST00000195226 929 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm42804-201ENSMUST00000199701 178 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm45042-201ENSMUST00000207377 211 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 AC153968.2-201ENSMUST00000215579 1140 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm2089-201ENSMUST00000218294 479 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 AC140209.1-201ENSMUST00000227875 284 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 AC137950.3-201ENSMUST00000228250 246 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm24411-201ENSMUST00000083428 131 ntBASIC7.79□□□□□ -1.16
Shmt1P50431 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Shmt1P50431 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Shmt1P50431 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shmt1P50431 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shmt1P50431 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm15422-201ENSMUST00000117453 541 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm22604-201ENSMUST00000157604 311 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm19175-201ENSMUST00000199895 916 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm43203-201ENSMUST00000200130 558 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm44112-201ENSMUST00000204787 372 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm44258-201ENSMUST00000204925 301 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm44722-201ENSMUST00000206473 436 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms