Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm9427-201ENSMUST00000116187 651 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm11241-201ENSMUST00000117371 896 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm12851-201ENSMUST00000117920 421 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm11997-201ENSMUST00000118697 313 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm15238-201ENSMUST00000119938 1296 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm15194-201ENSMUST00000120453 434 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm12133-201ENSMUST00000121775 661 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm3757-201ENSMUST00000125878 675 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Mir3060-201ENSMUST00000175339 83 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm7560-201ENSMUST00000187748 873 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm28583-201ENSMUST00000188903 2141 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm18599-201ENSMUST00000206729 1125 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm45343-201ENSMUST00000210452 828 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm18705-201ENSMUST00000215985 913 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm4178-201ENSMUST00000218307 649 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 AC130673.2-201ENSMUST00000228091 797 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Rfx1P48377 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm6545-201ENSMUST00000217186 1786 ntBASIC9.09□□□□□ -0.95
Rfx1P48377 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rfx1P48377 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rfx1P48377 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm42636-201ENSMUST00000197174 2239 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm37984-201ENSMUST00000191641 3733 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm13828-201ENSMUST00000122278 363 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm19035-202ENSMUST00000194575 959 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Gm18598-201ENSMUST00000207724 597 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm5609-201ENSMUST00000210008 1267 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Gm8637-201ENSMUST00000212919 1085 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 AC107452.2-201ENSMUST00000228415 363 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rfx1P48377 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rfx1P48377 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms