Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.39□□□□□ -1.23
HttP42859 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.39□□□□□ -1.23
HttP42859 Gm21301-201ENSMUST00000189476 699 ntBASIC7.39□□□□□ -1.23
HttP42859 Gm38131-201ENSMUST00000192449 430 ntBASIC7.39□□□□□ -1.23
HttP42859 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.39□□□□□ -1.23
HttP42859 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
HttP42859 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm42608-201ENSMUST00000197563 2018 ntBASIC7.39□□□□□ -1.23
HttP42859 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
HttP42859 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Mir700-201ENSMUST00000102169 79 ntBASIC7.39□□□□□ -1.23
HttP42859 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Lipe-203ENSMUST00000105177 1251 ntBASIC7.39□□□□□ -1.23
HttP42859 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm12262-201ENSMUST00000119915 305 ntBASIC7.39□□□□□ -1.23
HttP42859 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.39□□□□□ -1.23
HttP42859 Gm42652-201ENSMUST00000199073 614 ntBASIC7.39□□□□□ -1.23
HttP42859 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
HttP42859 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.39□□□□□ -1.23
HttP42859 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.39□□□□□ -1.23
HttP42859 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HttP42859 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
HttP42859 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
HttP42859 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HttP42859 Gm22261-201ENSMUST00000158691 324 ntBASIC7.38□□□□□ -1.23
HttP42859 Mir3062-201ENSMUST00000174986 105 ntBASIC7.38□□□□□ -1.23
HttP42859 Gm25690-201ENSMUST00000175439 77 ntBASIC7.38□□□□□ -1.23
HttP42859 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.38□□□□□ -1.23
HttP42859 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HttP42859 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.38□□□□□ -1.23
HttP42859 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm42886-201ENSMUST00000199214 466 ntBASIC7.38□□□□□ -1.23
HttP42859 Gm5324-201ENSMUST00000208115 476 ntBASIC7.38□□□□□ -1.23
HttP42859 Gm3266-201ENSMUST00000217832 591 ntBASIC7.38□□□□□ -1.23
HttP42859 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm24621-201ENSMUST00000082679 140 ntBASIC7.38□□□□□ -1.23
HttP42859 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.38□□□□□ -1.23
HttP42859 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.38□□□□□ -1.23
HttP42859 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Mir697-201ENSMUST00000102316 109 ntBASIC7.38□□□□□ -1.23
HttP42859 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7.38□□□□□ -1.23
HttP42859 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 Gm18405-201ENSMUST00000220743 511 ntBASIC7.38□□□□□ -1.23
HttP42859 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.38□□□□□ -1.23
HttP42859 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.38□□□□□ -1.23
HttP42859 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.38□□□□□ -1.23
HttP42859 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
HttP42859 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HttP42859 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.38□□□□□ -1.23
HttP42859 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HttP42859 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.37□□□□□ -1.23
HttP42859 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.37□□□□□ -1.23
HttP42859 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
HttP42859 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms