Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm8192-201ENSMUST00000182196 958 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm18350-201ENSMUST00000187395 955 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm9451-201ENSMUST00000188491 604 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm6750-201ENSMUST00000189273 268 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm37871-201ENSMUST00000194973 688 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC7.19□□□□□ -1.26
Lire1P11260 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm42932-201ENSMUST00000197280 744 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm42464-202ENSMUST00000198111 774 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Lire1P11260 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.19□□□□□ -1.26
Lire1P11260 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.19□□□□□ -1.26
Lire1P11260 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm5173-201ENSMUST00000219616 950 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm8153-201ENSMUST00000219844 952 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm21321-201ENSMUST00000220179 446 ntBASIC7.19□□□□□ -1.26
Lire1P11260 AC207128.2-202ENSMUST00000224010 808 ntBASIC7.19□□□□□ -1.26
Lire1P11260 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.19□□□□□ -1.26
Lire1P11260 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC7.19□□□□□ -1.26
Lire1P11260 Mir185-201ENSMUST00000083530 65 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Lire1P11260 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Lire1P11260 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm23484-201ENSMUST00000104178 131 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm11969-201ENSMUST00000118848 356 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Gm26046-201ENSMUST00000157312 166 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm26408-201ENSMUST00000157672 127 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm24050-201ENSMUST00000158623 290 ntBASIC7.18□□□□□ -1.26
Lire1P11260 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm29577-201ENSMUST00000186427 693 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm5539-201ENSMUST00000192177 966 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm37339-201ENSMUST00000194142 392 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm42429-201ENSMUST00000198579 558 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm42767-201ENSMUST00000198583 632 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm19810-201ENSMUST00000218521 251 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.18□□□□□ -1.26
Lire1P11260 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Lire1P11260 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Lire1P11260 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Gm26003-201ENSMUST00000083061 113 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Lire1P11260 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.18□□□□□ -1.26
Lire1P11260 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lire1P11260 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Lire1P11260 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms