Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm15054-201ENSMUST00000117393 281 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm6931-201ENSMUST00000183103 371 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm43040-201ENSMUST00000202399 558 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm8804-201ENSMUST00000212292 798 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.9□□□□□ -1.14
Chmp6P0C0A3 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Chmp6P0C0A3 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Chmp6P0C0A3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.9□□□□□ -1.15
Chmp6P0C0A3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Chmp6P0C0A3 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm22470-201ENSMUST00000104117 130 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm22035-201ENSMUST00000157284 228 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm21430-201ENSMUST00000182998 998 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm28573-201ENSMUST00000187821 380 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm28145-201ENSMUST00000189742 380 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm28400-201ENSMUST00000191332 380 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm44931-201ENSMUST00000206056 545 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm45446-201ENSMUST00000209348 216 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Diaph3-204ENSMUST00000226254 682 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm2531-201ENSMUST00000075609 512 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.89□□□□□ -1.15
Chmp6P0C0A3 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Gm25614-201ENSMUST00000104013 133 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Gm14891-201ENSMUST00000117378 596 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Gm14248-201ENSMUST00000117790 544 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Gm14465-201ENSMUST00000120603 567 ntBASIC7.88□□□□□ -1.15
Chmp6P0C0A3 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms