Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm14201-201ENSMUST00000117627 289 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm13545-201ENSMUST00000119044 482 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm11850-201ENSMUST00000119679 479 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm8916-201ENSMUST00000119732 949 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm22795-201ENSMUST00000157233 118 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm3611-201ENSMUST00000173687 877 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm27026-201ENSMUST00000183003 892 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm28416-201ENSMUST00000188334 292 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm18428-201ENSMUST00000194986 791 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm20690-202ENSMUST00000195126 355 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp2aQ9DB34 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm22025-201ENSMUST00000122734 302 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm10157-201ENSMUST00000139408 343 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm22882-201ENSMUST00000157749 124 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm18191-201ENSMUST00000174624 824 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm26959-201ENSMUST00000182376 978 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm37270-201ENSMUST00000194277 330 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm42734-201ENSMUST00000201656 878 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm4796-201ENSMUST00000219802 624 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp2aQ9DB34 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.54□□□□□ -1.2
Chmp2aQ9DB34 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.54□□□□□ -1.2
Chmp2aQ9DB34 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.54□□□□□ -1.2
Chmp2aQ9DB34 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp2aQ9DB34 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms