Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm29573-201ENSMUST00000190291 919 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm29503-201ENSMUST00000191044 930 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm17806-201ENSMUST00000195844 383 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm42529-201ENSMUST00000201843 741 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 AC156795.1-201ENSMUST00000214655 414 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 AC125190.2-201ENSMUST00000221160 497 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 CT030662.1-201ENSMUST00000227380 232 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 AC154239.2-201ENSMUST00000227859 233 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm6378-201ENSMUST00000084199 444 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Gm17229-202ENSMUST00000166792 1753 ntBASIC8.05□□□□□ -1.12
Trim42Q9D2H5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Grik1-210ENSMUST00000228034 2708 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm37675-201ENSMUST00000192303 2847 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Lyg1-202ENSMUST00000114894 798 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm14624-201ENSMUST00000117746 192 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm14686-201ENSMUST00000119926 343 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm12178-201ENSMUST00000120545 330 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Mup-ps1-201ENSMUST00000120720 544 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm11686-201ENSMUST00000122397 333 ntBASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim42Q9D2H5 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms