Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm23358-201ENSMUST00000103887 110 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm12075-201ENSMUST00000117426 397 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm11901-201ENSMUST00000120412 437 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm14826-201ENSMUST00000121284 901 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Mir3078-201ENSMUST00000175231 87 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm20587-201ENSMUST00000186367 1186 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm6799-201ENSMUST00000186919 573 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm44845-201ENSMUST00000208773 335 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm45255-201ENSMUST00000209943 811 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm9472-201ENSMUST00000221625 526 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 AC207128.1-201ENSMUST00000225928 799 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Mir365-2-201ENSMUST00000083555 112 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm8802-201ENSMUST00000118633 740 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm12677-201ENSMUST00000118668 426 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm12034-201ENSMUST00000119032 399 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm15971-201ENSMUST00000119372 211 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm15224-201ENSMUST00000120501 388 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm6100-201ENSMUST00000180253 403 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm26980-201ENSMUST00000183321 395 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Mir6912-201ENSMUST00000184456 70 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm19124-201ENSMUST00000191041 832 ntBASIC7.35□□□□□ -1.23
Trim8Q99PJ2 Gm37247-201ENSMUST00000192549 730 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 200.3 ms