Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm5316-201ENSMUST00000050391 270 ntBASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cstf3Q99LI7 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm14645-201ENSMUST00000118597 417 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm14202-201ENSMUST00000120121 311 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm26407-201ENSMUST00000158504 307 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm6428-201ENSMUST00000161062 345 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm9451-201ENSMUST00000188491 604 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cstf3Q99LI7 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm25167-201ENSMUST00000104188 120 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Mir669e-201ENSMUST00000117003 119 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm15928-201ENSMUST00000122455 280 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm4835-201ENSMUST00000155839 972 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm25437-201ENSMUST00000158282 132 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm8046-201ENSMUST00000172151 616 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm29008-201ENSMUST00000189387 298 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm37293-201ENSMUST00000191658 295 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm37392-201ENSMUST00000192098 516 ntBASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cstf3Q99LI7 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms