Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm4785-201ENSMUST00000191025 751 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm45497-201ENSMUST00000211701 740 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm6581-201ENSMUST00000214545 260 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 AC124408.1-201ENSMUST00000228938 707 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.75□□□□□ -1.01
Brf1Q8CFK2 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm8624-201ENSMUST00000118083 432 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm8662-201ENSMUST00000118644 574 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm14202-201ENSMUST00000120121 311 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm28952-201ENSMUST00000189285 681 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm18960-201ENSMUST00000222962 713 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm24924-201ENSMUST00000084007 164 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Brf1Q8CFK2 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm17170-201ENSMUST00000112785 316 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm12459-201ENSMUST00000120659 356 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm10913-201ENSMUST00000133732 463 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm7481-201ENSMUST00000182020 995 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm27401-201ENSMUST00000184052 173 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm6472-202ENSMUST00000187973 582 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm43108-201ENSMUST00000200525 293 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm44380-201ENSMUST00000203125 293 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.73□□□□□ -1.01
Brf1Q8CFK2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms