Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm22671-201ENSMUST00000104420 134 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm14727-201ENSMUST00000118526 525 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm5135-201ENSMUST00000121100 573 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm14721-201ENSMUST00000121381 525 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm12321-201ENSMUST00000121485 804 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm24057-201ENSMUST00000158616 302 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm28413-201ENSMUST00000189369 291 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm38840-201ENSMUST00000204716 843 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm13798-201ENSMUST00000118285 139 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm11926-201ENSMUST00000118520 430 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm13463-201ENSMUST00000119020 233 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm14156-201ENSMUST00000121538 483 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm22275-201ENSMUST00000122470 310 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm29354-201ENSMUST00000187613 696 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm5708-201ENSMUST00000196289 886 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm5154-201ENSMUST00000203971 399 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm35638-201ENSMUST00000220724 652 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm22865-201ENSMUST00000083949 214 ntBASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Atg4aQ8C9S8 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm12601-201ENSMUST00000118994 846 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm15188-201ENSMUST00000121264 704 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm23392-201ENSMUST00000157580 113 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Mir199b-201ENSMUST00000175066 110 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm27684-201ENSMUST00000183778 80 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm5261-201ENSMUST00000185860 713 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm43040-201ENSMUST00000202399 558 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44590-201ENSMUST00000206161 391 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44971-201ENSMUST00000206192 337 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44979-201ENSMUST00000206218 287 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44833-201ENSMUST00000208368 331 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms