Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm15188-201ENSMUST00000121264 704 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm28070-201ENSMUST00000191502 445 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm37322-201ENSMUST00000193409 337 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm8921-201ENSMUST00000204306 649 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 AC152394.1-201ENSMUST00000227360 1086 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 CT025630.2-201ENSMUST00000228293 487 ntBASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc60Q8C4J0 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm10259-201ENSMUST00000091289 1590 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm15538-201ENSMUST00000121410 313 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm12321-201ENSMUST00000121485 804 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm14251-201ENSMUST00000122133 279 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm22025-201ENSMUST00000122734 302 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm26323-201ENSMUST00000157743 175 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm4613-201ENSMUST00000165488 276 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Pea15b-201ENSMUST00000182806 387 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm27684-201ENSMUST00000183778 80 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm38022-201ENSMUST00000191762 403 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm37548-201ENSMUST00000194519 3814 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm29759-201ENSMUST00000205860 327 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm19056-201ENSMUST00000218220 797 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 AC133598.2-201ENSMUST00000224302 624 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 AC132590.1-201ENSMUST00000224374 1164 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 AC117949.1-201ENSMUST00000225547 419 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm2840-201ENSMUST00000048361 411 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ccdc60Q8C4J0 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 CT009604.1-201ENSMUST00000223900 1328 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Mir683-2-201ENSMUST00000102099 109 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm11257-201ENSMUST00000121313 315 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm7418-201ENSMUST00000162120 801 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm26179-201ENSMUST00000177723 132 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Mir683-1-201ENSMUST00000179371 109 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Mir8114-201ENSMUST00000183582 111 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Ighv8-15-201ENSMUST00000197770 294 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm17611-202ENSMUST00000220613 814 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms