Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ctdnep1Q3TP92 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm14893-201ENSMUST00000117904 282 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm15484-201ENSMUST00000118871 828 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm12944-201ENSMUST00000119262 463 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm13940-201ENSMUST00000121023 301 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Mir7084-201ENSMUST00000183876 70 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm8101-201ENSMUST00000192796 478 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm18752-201ENSMUST00000192876 608 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm10416-201ENSMUST00000197379 645 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm44931-201ENSMUST00000206056 545 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm34424-201ENSMUST00000213400 782 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm18503-201ENSMUST00000220340 728 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm25852-201ENSMUST00000082790 130 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Ctdnep1Q3TP92 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Ctdnep1Q3TP92 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.08
Ctdnep1Q3TP92 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Ctdnep1Q3TP92 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ctdnep1Q3TP92 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ctdnep1Q3TP92 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Mir503-201ENSMUST00000102168 71 ntBASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Gm23834-201ENSMUST00000104436 129 ntBASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Gm17170-201ENSMUST00000112785 316 ntBASIC8.27□□□□□ -1.09
Ctdnep1Q3TP92 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms