Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm23062-201ENSMUST00000102349 110 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm23358-201ENSMUST00000103887 110 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm11933-201ENSMUST00000121550 375 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm12634-201ENSMUST00000122157 992 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm25048-201ENSMUST00000158598 91 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm17223-201ENSMUST00000171413 481 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm23633-201ENSMUST00000175293 119 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm8167-201ENSMUST00000183320 958 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Hmgb1P63158 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm18330-201ENSMUST00000199246 547 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm7565-201ENSMUST00000203611 623 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm19007-201ENSMUST00000217746 874 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.38□□□□□ -1.07
Hmgb1P63158 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Hmgb1P63158 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hmgb1P63158 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm18719-201ENSMUST00000196696 1413 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm25608-201ENSMUST00000104021 132 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm24334-201ENSMUST00000104210 128 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm12442-201ENSMUST00000118372 338 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm15780-201ENSMUST00000121283 935 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm15530-201ENSMUST00000122206 555 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Mir1983-201ENSMUST00000157523 132 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.37□□□□□ -1.07
Hmgb1P63158 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmgb1P63158 Mir6974-201ENSMUST00000184381 83 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms