Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
P20040 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
P20040 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
P20040 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
P20040 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
P20040 Gm23834-201ENSMUST00000104436 129 ntBASIC6.46□□□□□ -1.38
P20040 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm5228-201ENSMUST00000117186 357 ntBASIC6.46□□□□□ -1.38
P20040 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.46□□□□□ -1.38
P20040 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.46□□□□□ -1.38
P20040 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.46□□□□□ -1.38
P20040 Gm14450-201ENSMUST00000119984 240 ntBASIC6.46□□□□□ -1.38
P20040 Gm13495-201ENSMUST00000121156 537 ntBASIC6.46□□□□□ -1.38
P20040 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm24647-201ENSMUST00000157112 113 ntBASIC6.46□□□□□ -1.38
P20040 Gm25692-201ENSMUST00000175444 125 ntBASIC6.46□□□□□ -1.38
P20040 Gm27019-201ENSMUST00000183056 404 ntBASIC6.46□□□□□ -1.38
P20040 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
P20040 Mir6972-201ENSMUST00000184774 64 ntBASIC6.46□□□□□ -1.38
P20040 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
P20040 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
P20040 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.46□□□□□ -1.38
P20040 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.46□□□□□ -1.38
P20040 Gm43590-201ENSMUST00000195987 387 ntBASIC6.46□□□□□ -1.38
P20040 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
P20040 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm43542-201ENSMUST00000199505 379 ntBASIC6.46□□□□□ -1.38
P20040 Gm42573-201ENSMUST00000202327 478 ntBASIC6.46□□□□□ -1.38
P20040 Gm5723-201ENSMUST00000203096 432 ntBASIC6.46□□□□□ -1.38
P20040 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.46□□□□□ -1.38
P20040 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
P20040 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.46□□□□□ -1.38
P20040 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.46□□□□□ -1.38
P20040 Gm45432-201ENSMUST00000210391 416 ntBASIC6.46□□□□□ -1.38
P20040 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.46□□□□□ -1.38
P20040 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.46□□□□□ -1.38
P20040 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm6885-201ENSMUST00000217261 372 ntBASIC6.46□□□□□ -1.38
P20040 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.46□□□□□ -1.38
P20040 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.46□□□□□ -1.38
P20040 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.46□□□□□ -1.38
P20040 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.46□□□□□ -1.38
P20040 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Olfr890-201ENSMUST00000079804 945 ntBASIC6.46□□□□□ -1.38
P20040 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
P20040 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
P20040 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
P20040 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
P20040 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.46□□□□□ -1.38
P20040 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.46□□□□□ -1.38
P20040 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.46□□□□□ -1.38
P20040 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.46□□□□□ -1.38
P20040 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P20040 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
P20040 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.45□□□□□ -1.38
P20040 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
P20040 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.45□□□□□ -1.38
P20040 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
P20040 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
P20040 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
P20040 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Mir669e-201ENSMUST00000117003 119 ntBASIC6.45□□□□□ -1.38
P20040 Gm6491-201ENSMUST00000118273 990 ntBASIC6.45□□□□□ -1.38
P20040 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.45□□□□□ -1.38
P20040 Gm15160-201ENSMUST00000120553 907 ntBASIC6.45□□□□□ -1.38
P20040 Gm13622-201ENSMUST00000120658 433 ntBASIC6.45□□□□□ -1.38
P20040 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm22948-201ENSMUST00000158561 243 ntBASIC6.45□□□□□ -1.38
P20040 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
P20040 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
P20040 Gm22408-201ENSMUST00000174925 65 ntBASIC6.45□□□□□ -1.38
P20040 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Gm29355-201ENSMUST00000188178 697 ntBASIC6.45□□□□□ -1.38
P20040 Gm28953-201ENSMUST00000188336 697 ntBASIC6.45□□□□□ -1.38
P20040 Gm20788-201ENSMUST00000190538 697 ntBASIC6.45□□□□□ -1.38
P20040 Gm37395-201ENSMUST00000194721 697 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms