Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC11.26□□□□□ -0.61
NclP09405 Gm13622-201ENSMUST00000120658 433 ntBASIC11.26□□□□□ -0.61
NclP09405 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC11.26□□□□□ -0.61
NclP09405 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NclP09405 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC11.26□□□□□ -0.61
NclP09405 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Gm18529-201ENSMUST00000193025 1257 ntBASIC11.26□□□□□ -0.61
NclP09405 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC11.26□□□□□ -0.61
NclP09405 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC11.26□□□□□ -0.61
NclP09405 Gm18690-201ENSMUST00000204488 985 ntBASIC11.26□□□□□ -0.61
NclP09405 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC11.26□□□□□ -0.61
NclP09405 AC164550.1-201ENSMUST00000217821 1066 ntBASIC11.26□□□□□ -0.61
NclP09405 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
NclP09405 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC11.26□□□□□ -0.61
NclP09405 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NclP09405 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
NclP09405 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC11.25□□□□□ -0.61
NclP09405 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Serpina3h-202ENSMUST00000116393 1226 ntBASIC11.25□□□□□ -0.61
NclP09405 Gm15778-201ENSMUST00000118469 608 ntBASIC11.25□□□□□ -0.61
NclP09405 Gm11585-201ENSMUST00000120901 569 ntBASIC11.25□□□□□ -0.61
NclP09405 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Gm29008-201ENSMUST00000189387 298 ntBASIC11.25□□□□□ -0.61
NclP09405 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Gm28266-201ENSMUST00000191410 439 ntBASIC11.25□□□□□ -0.61
NclP09405 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC11.25□□□□□ -0.61
NclP09405 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC11.25□□□□□ -0.61
NclP09405 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NclP09405 Gm43867-201ENSMUST00000203860 525 ntBASIC11.25□□□□□ -0.61
NclP09405 Gm19253-201ENSMUST00000204279 307 ntBASIC11.25□□□□□ -0.61
NclP09405 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC11.25□□□□□ -0.61
NclP09405 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC11.25□□□□□ -0.61
NclP09405 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC11.25□□□□□ -0.61
NclP09405 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC11.25□□□□□ -0.61
NclP09405 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 AC192091.1-201ENSMUST00000218668 439 ntBASIC11.25□□□□□ -0.61
NclP09405 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Olfr1153-201ENSMUST00000052300 957 ntBASIC11.25□□□□□ -0.61
NclP09405 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
NclP09405 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NclP09405 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NclP09405 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
NclP09405 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC11.24□□□□□ -0.61
NclP09405 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
NclP09405 Gm13525-201ENSMUST00000120607 478 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm11882-201ENSMUST00000121463 506 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NclP09405 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
NclP09405 Gm16580-201ENSMUST00000162696 1044 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm7289-201ENSMUST00000168993 734 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC11.24□□□□□ -0.61
NclP09405 Gm27596-201ENSMUST00000185061 83 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC11.24□□□□□ -0.61
NclP09405 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC11.24□□□□□ -0.61
NclP09405 Gm29759-201ENSMUST00000205860 327 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm45198-201ENSMUST00000206796 591 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC11.24□□□□□ -0.61
NclP09405 AC154382.1-201ENSMUST00000220958 1282 ntBASIC11.24□□□□□ -0.61
NclP09405 AC164302.1-201ENSMUST00000227036 433 ntBASIC11.24□□□□□ -0.61
NclP09405 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
NclP09405 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC11.24□□□□□ -0.61
NclP09405 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
NclP09405 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Gm45528-201ENSMUST00000209854 3145 ntBASIC11.24□□□□□ -0.61
NclP09405 Gm16072-201ENSMUST00000119574 2377 ntBASIC11.24□□□□□ -0.61
NclP09405 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NclP09405 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
NclP09405 Gm37274-201ENSMUST00000192167 1682 ntBASIC11.24□□□□□ -0.61
NclP09405 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
NclP09405 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NclP09405 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NclP09405 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms