Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm23740-201ENSMUST00000157385 100 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm26729-201ENSMUST00000180744 352 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm37689-201ENSMUST00000193139 275 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Ighv1-33-201ENSMUST00000193220 350 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Mark4-ps-201ENSMUST00000196140 384 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm42932-201ENSMUST00000197280 744 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm43212-201ENSMUST00000198208 394 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm43725-201ENSMUST00000200122 369 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm19254-201ENSMUST00000204828 294 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm2089-201ENSMUST00000218294 479 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm7727-201ENSMUST00000219830 671 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 AC069562.1-201ENSMUST00000224206 434 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb3O54879 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 AC125487.1-201ENSMUST00000217888 1300 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm13456-201ENSMUST00000118928 1365 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm42462-201ENSMUST00000196543 1363 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 AC154747.4-203ENSMUST00000225893 1384 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 AC135083.2-201ENSMUST00000228599 1456 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm7647-201ENSMUST00000200996 1389 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm22438-201ENSMUST00000104049 132 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm23485-201ENSMUST00000104181 155 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm24195-201ENSMUST00000116804 137 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm12604-201ENSMUST00000118382 380 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm13006-201ENSMUST00000118683 214 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm9516-201ENSMUST00000119684 424 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm13674-201ENSMUST00000121276 823 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms