Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm26784-201ENSMUST00000181666 410 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm18765-201ENSMUST00000203166 660 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm43926-201ENSMUST00000203978 430 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm45446-201ENSMUST00000209348 216 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm7419-201ENSMUST00000209962 925 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm9110-201ENSMUST00000219035 617 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm26967-201ENSMUST00000182878 2303 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm14824-201ENSMUST00000119421 737 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm8916-201ENSMUST00000119732 949 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm26025-201ENSMUST00000158655 271 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm6931-201ENSMUST00000183103 371 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm7436-201ENSMUST00000187229 391 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm43558-201ENSMUST00000200155 210 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm6667-201ENSMUST00000217169 564 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.12□□□□□ -1.43
Usf3B2RUQ2 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Usf3B2RUQ2 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.11□□□□□ -1.43
Usf3B2RUQ2 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Gm24812-201ENSMUST00000175315 284 ntBASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Mir6971-201ENSMUST00000183497 63 ntBASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Mir7082-201ENSMUST00000183526 92 ntBASIC6.11□□□□□ -1.43
Usf3B2RUQ2 Gm29383-201ENSMUST00000188284 480 ntBASIC6.11□□□□□ -1.43
Usf3B2RUQ2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms