Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm44509-201ENSMUST00000205400 1324 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm11188-201ENSMUST00000122382 388 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm22948-201ENSMUST00000158561 243 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm27542-201ENSMUST00000184184 256 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm27617-201ENSMUST00000184321 168 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm7436-201ENSMUST00000187229 391 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm7369-201ENSMUST00000192738 936 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm42573-201ENSMUST00000202327 478 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm43226-201ENSMUST00000202438 259 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm25926-201ENSMUST00000082899 160 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.92□□□□□ -1.3
Trim3Q9R1R2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm12306-201ENSMUST00000117256 171 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm13521-201ENSMUST00000118922 866 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm12844-201ENSMUST00000119463 582 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm15160-201ENSMUST00000120553 907 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Mir1983-201ENSMUST00000157523 132 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Mir7669-201ENSMUST00000183442 58 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms