Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm11320-201ENSMUST00000119434 463 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm8421-201ENSMUST00000119439 305 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm13622-201ENSMUST00000120658 433 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm12321-201ENSMUST00000121485 804 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm5843-201ENSMUST00000121631 476 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm12885-201ENSMUST00000122246 328 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm14713-201ENSMUST00000122362 686 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm16113-201ENSMUST00000159629 372 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm19086-201ENSMUST00000190772 665 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm43772-201ENSMUST00000202052 379 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm10043-201ENSMUST00000210691 235 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm18789-201ENSMUST00000216115 550 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 AC133948.2-201ENSMUST00000217850 378 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm18955-201ENSMUST00000223173 649 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr683-201ENSMUST00000061284 960 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 n-R5s60-201ENSMUST00000083299 119 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 BC085271-201ENSMUST00000191852 1487 ntBASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RtcbQ99LF4 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm44289-201ENSMUST00000204144 1390 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm15913-201ENSMUST00000118492 331 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm14863-201ENSMUST00000119648 307 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm13506-201ENSMUST00000120391 1083 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm4773-201ENSMUST00000120392 702 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm25047-201ENSMUST00000122667 104 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm16138-201ENSMUST00000159341 821 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm17075-201ENSMUST00000171924 670 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC9.38□□□□□ -0.91
RtcbQ99LF4 Gm18980-201ENSMUST00000199098 1079 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms