Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm7493-201ENSMUST00000085919 626 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Mir706-201ENSMUST00000102262 84 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm22426-201ENSMUST00000103811 96 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm15209-201ENSMUST00000117703 400 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm15047-201ENSMUST00000118891 454 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm6451-201ENSMUST00000121488 717 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm25437-201ENSMUST00000158282 132 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm25770-201ENSMUST00000158566 115 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm9423-201ENSMUST00000183173 997 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm31579-201ENSMUST00000203306 966 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC159476.2-201ENSMUST00000216221 418 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC118249.1-201ENSMUST00000224822 608 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC140368.1-202ENSMUST00000226131 658 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm9801-201ENSMUST00000054860 408 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm20302-201ENSMUST00000080671 275 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm25926-201ENSMUST00000082899 160 ntBASIC7.11□□□□□ -1.27
Clrn1Q8K445 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clrn1Q8K445 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms