Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm44833-201ENSMUST00000208368 331 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm43411-201ENSMUST00000196235 1579 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm25614-201ENSMUST00000104013 133 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm22604-201ENSMUST00000157604 311 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm22702-201ENSMUST00000175372 69 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm29562-201ENSMUST00000190113 904 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm20136-201ENSMUST00000207501 891 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm18469-201ENSMUST00000208850 439 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm6667-201ENSMUST00000217169 564 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm5250-201ENSMUST00000059065 321 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Nup88Q8CEC0 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm23701-201ENSMUST00000103893 110 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm15153-201ENSMUST00000119867 274 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm25164-201ENSMUST00000158908 116 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm21181-201ENSMUST00000186249 330 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm42804-201ENSMUST00000199701 178 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm44892-201ENSMUST00000208595 488 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms