Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm11880-201ENSMUST00000117612 399 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm14787-201ENSMUST00000121236 388 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm9697-201ENSMUST00000147052 997 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm22262-201ENSMUST00000158713 86 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm7502-201ENSMUST00000169235 733 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm7341-201ENSMUST00000192183 926 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm43812-202ENSMUST00000202701 581 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm45198-201ENSMUST00000206796 591 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm9110-201ENSMUST00000219035 617 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.52□□□□□ -1.37
H3f3aP84244 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.52□□□□□ -1.37
H3f3aP84244 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.52□□□□□ -1.37
H3f3aP84244 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3f3aP84244 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
H3f3aP84244 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Mir503-201ENSMUST00000102168 71 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm13545-201ENSMUST00000119044 482 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Gm2735-201ENSMUST00000136133 277 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm22882-201ENSMUST00000157749 124 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm17047-201ENSMUST00000167709 430 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Gm27373-201ENSMUST00000184017 184 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Gm37295-201ENSMUST00000192186 109 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Gm42734-201ENSMUST00000201656 878 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.51□□□□□ -1.37
H3f3aP84244 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.51□□□□□ -1.37
H3f3aP84244 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
H3f3aP84244 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H3f3aP84244 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms