Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm23701-201ENSMUST00000103893 110 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm5931-201ENSMUST00000121308 477 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm12464-201ENSMUST00000121385 1016 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm15534-201ENSMUST00000137642 562 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm17051-201ENSMUST00000170787 487 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm7481-201ENSMUST00000182020 995 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm28803-201ENSMUST00000190385 764 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Hmgb1P63158 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 AC154506.2-201ENSMUST00000225481 1276 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hmgb1P63158 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hmgb1P63158 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.4□□□□□ -1.07
Hmgb1P63158 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Hmgb1P63158 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hmgb1P63158 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hmgb1P63158 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Hmgb1P63158 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hmgb1P63158 Gm38118-201ENSMUST00000192052 2222 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.39□□□□□ -1.07
Hmgb1P63158 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm11474-201ENSMUST00000120814 277 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm15596-201ENSMUST00000121139 784 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm11295-201ENSMUST00000121379 803 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9286-201ENSMUST00000173586 508 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm26784-201ENSMUST00000181666 410 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm6057-201ENSMUST00000195927 314 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9689-201ENSMUST00000210009 428 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm18972-201ENSMUST00000218873 630 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hmgb1P63158 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.39□□□□□ -1.07
Hmgb1P63158 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmgb1P63158 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hmgb1P63158 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms