Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm44255-201ENSMUST00000203456 2053 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm24257-201ENSMUST00000104472 131 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Rfx1P48377 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm11877-201ENSMUST00000118921 852 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm12687-201ENSMUST00000119752 706 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm14528-201ENSMUST00000120615 231 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC9.13□□□□□ -0.95
Rfx1P48377 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm24854-201ENSMUST00000158025 98 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm23663-201ENSMUST00000158045 80 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm27782-201ENSMUST00000185059 199 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm29474-201ENSMUST00000187688 379 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm28396-201ENSMUST00000190309 379 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm36961-201ENSMUST00000191980 132 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm17977-201ENSMUST00000198743 574 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm42796-201ENSMUST00000199913 1087 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm19211-201ENSMUST00000200251 1206 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm43596-201ENSMUST00000202818 884 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm40598-201ENSMUST00000222953 547 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 AC153646.1-201ENSMUST00000223229 1279 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 AC163038.1-201ENSMUST00000223632 1142 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Rfx1P48377 AC132833.3-201ENSMUST00000227472 866 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 AC154419.1-201ENSMUST00000227627 272 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Rfx1P48377 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm26132-201ENSMUST00000083166 148 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm25099-201ENSMUST00000093716 116 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Rfx1P48377 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rfx1P48377 AC126028.1-201ENSMUST00000226218 2123 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rfx1P48377 AC105407.2-205ENSMUST00000224680 2733 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Snord65-201ENSMUST00000104269 72 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm23946-201ENSMUST00000104423 197 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Gm15047-201ENSMUST00000118891 454 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm12955-201ENSMUST00000119689 957 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm16456-201ENSMUST00000174431 920 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm23187-201ENSMUST00000175746 86 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Gm20915-201ENSMUST00000191575 663 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC9.12□□□□□ -0.95
Rfx1P48377 Clec2j-202ENSMUST00000203658 606 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm43967-201ENSMUST00000203787 301 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Gm18996-201ENSMUST00000214851 755 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 AC207128.2-202ENSMUST00000224010 808 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 AC154461.4-201ENSMUST00000224878 468 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 AC154838.3-201ENSMUST00000228876 965 ntBASIC9.12□□□□□ -0.95
Rfx1P48377 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rfx1P48377 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Rfx1P48377 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.12□□□□□ -0.95
Rfx1P48377 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Rfx1P48377 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms