Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Gm26016-201ENSMUST00000104403 129 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm24442-201ENSMUST00000157238 327 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm27782-201ENSMUST00000185059 199 ntBASIC8.57□□□□□ -1.04
Traf1P39428 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Gm18352-201ENSMUST00000189113 902 ntBASIC8.57□□□□□ -1.04
Traf1P39428 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Gm20136-201ENSMUST00000207501 891 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Traf1P39428 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Traf1P39428 Olfr683-201ENSMUST00000061284 960 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Traf1P39428 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.57□□□□□ -1.04
Traf1P39428 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Traf1P39428 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Traf1P39428 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Traf1P39428 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Npr3-204ENSMUST00000228489 1969 ntBASIC8.56□□□□□ -1.04
Traf1P39428 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Traf1P39428 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Traf1P39428 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Traf1P39428 Gm11371-201ENSMUST00000120294 385 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.56□□□□□ -1.04
Traf1P39428 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Gm19815-201ENSMUST00000175818 335 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Gm20614-201ENSMUST00000177106 632 ntBASIC8.56□□□□□ -1.04
Traf1P39428 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.56□□□□□ -1.04
Traf1P39428 Gm9419-201ENSMUST00000200672 567 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Gm44192-201ENSMUST00000204195 556 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.56□□□□□ -1.04
Traf1P39428 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.56□□□□□ -1.04
Traf1P39428 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.56□□□□□ -1.04
Traf1P39428 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.56□□□□□ -1.04
Traf1P39428 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.56□□□□□ -1.04
Traf1P39428 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Traf1P39428 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Traf1P39428 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Traf1P39428 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Traf1P39428 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.56□□□□□ -1.04
Traf1P39428 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Traf1P39428 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm15842-201ENSMUST00000120513 618 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm11726-201ENSMUST00000121028 424 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.55□□□□□ -1.04
Traf1P39428 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms