Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Gm20945-201ENSMUST00000178122 1145 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm25947-201ENSMUST00000180343 110 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Mir6999-201ENSMUST00000183498 61 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Igkv8-22-201ENSMUST00000199501 367 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm21054-201ENSMUST00000203981 380 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm19254-201ENSMUST00000204828 294 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm4536-201ENSMUST00000209157 542 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC6.51□□□□□ -1.37
Nedd8P29595 Gm5374-202ENSMUST00000222910 314 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Nedd8P29595 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.51□□□□□ -1.37
Nedd8P29595 Gm25129-201ENSMUST00000082651 133 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Nedd8P29595 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
Nedd8P29595 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.51□□□□□ -1.37
Nedd8P29595 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Nedd8P29595 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Nedd8P29595 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.5□□□□□ -1.37
Nedd8P29595 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm13192-201ENSMUST00000101199 208 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm12470-201ENSMUST00000117239 1049 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm5611-201ENSMUST00000164523 852 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Gm8974-201ENSMUST00000175770 479 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.5□□□□□ -1.37
Nedd8P29595 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm28413-201ENSMUST00000189369 291 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm20568-201ENSMUST00000197129 208 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Gm43008-201ENSMUST00000202346 286 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm8948-201ENSMUST00000216371 370 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.5□□□□□ -1.37
Nedd8P29595 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.5□□□□□ -1.37
Nedd8P29595 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Nedd8P29595 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nedd8P29595 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.49□□□□□ -1.37
Nedd8P29595 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nedd8P29595 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.49□□□□□ -1.37
Nedd8P29595 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Nedd8P29595 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nedd8P29595 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.49□□□□□ -1.37
Nedd8P29595 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Nedd8P29595 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nedd8P29595 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.49□□□□□ -1.37
Nedd8P29595 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms