Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm19148-201ENSMUST00000197045 429 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm43815-201ENSMUST00000197676 990 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm5981-201ENSMUST00000199912 487 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm5307-201ENSMUST00000204772 760 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm43934-201ENSMUST00000205095 388 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm18024-201ENSMUST00000218516 690 ntBASIC7.22□□□□□ -1.25
Lire1P11260 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.22□□□□□ -1.25
Lire1P11260 AC192333.4-201ENSMUST00000224269 981 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Lire1P11260 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Lire1P11260 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.21□□□□□ -1.25
Lire1P11260 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Lire1P11260 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Lire1P11260 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.21□□□□□ -1.25
Lire1P11260 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Lire1P11260 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Lire1P11260 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.21□□□□□ -1.25
Lire1P11260 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Lire1P11260 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm15971-201ENSMUST00000119372 211 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm13440-201ENSMUST00000121665 496 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm24347-201ENSMUST00000158711 142 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 Gm5920-201ENSMUST00000187390 853 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm28341-201ENSMUST00000190883 472 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm7115-201ENSMUST00000193706 832 ntBASIC7.21□□□□□ -1.26
Lire1P11260 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm42667-201ENSMUST00000196132 234 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Lire1P11260 Gm9057-201ENSMUST00000198791 296 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 AC132304.1-201ENSMUST00000218860 135 ntBASIC7.21□□□□□ -1.26
Lire1P11260 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.21□□□□□ -1.26
Lire1P11260 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.21□□□□□ -1.26
Lire1P11260 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm24143-201ENSMUST00000082633 145 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm10705-201ENSMUST00000098980 461 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms