Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm15928-201ENSMUST00000122455 280 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm25842-201ENSMUST00000122590 322 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm25808-201ENSMUST00000122784 284 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 4930417H01Rik-201ENSMUST00000123403 1233 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Apoc2-202ENSMUST00000134116 569 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Hk1os-203ENSMUST00000143122 1218 ntTSL 2 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm25979-201ENSMUST00000157177 138 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm22484-201ENSMUST00000157992 306 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm24225-201ENSMUST00000158825 98 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm16238-201ENSMUST00000159343 586 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm26931-201ENSMUST00000182273 609 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm9892-201ENSMUST00000182415 992 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm28008-201ENSMUST00000184021 186 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm27350-201ENSMUST00000185109 98 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Trbv22-201ENSMUST00000191697 291 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm40117-201ENSMUST00000198827 369 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm43985-201ENSMUST00000203283 757 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm17918-201ENSMUST00000205315 574 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm44982-201ENSMUST00000208795 471 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm6150-201ENSMUST00000217775 577 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Mylpf-201ENSMUST00000032910 766 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Hoxd3P09027 n-R5s74-201ENSMUST00000082654 116 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Olfr1238-201ENSMUST00000099781 949 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm42589-201ENSMUST00000199097 1751 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Ambn-202ENSMUST00000198265 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm17184-202ENSMUST00000227180 1586 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Itm2a-201ENSMUST00000033591 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Plp1-202ENSMUST00000113085 2540 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm46995-201ENSMUST00000223445 1378 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Cwc22-203ENSMUST00000111819 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Fkbp5-206ENSMUST00000177939 3844 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Mtmr6-201ENSMUST00000022563 3813 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Txnrd1-205ENSMUST00000219368 3622 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Crbn-201ENSMUST00000013882 2072 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm43792-201ENSMUST00000202492 2210 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Mcf2l-204ENSMUST00000110867 3864 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Hoxd3P09027 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm24542-201ENSMUST00000103870 110 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Mir465c-2-201ENSMUST00000104757 81 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Slc50a1-202ENSMUST00000107460 785 ntTSL 5 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Mir669i-201ENSMUST00000117007 127 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm15175-201ENSMUST00000117629 132 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm14630-201ENSMUST00000118057 246 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm12268-201ENSMUST00000118398 442 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm13576-201ENSMUST00000120851 778 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm9670-201ENSMUST00000121201 540 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm11692-201ENSMUST00000122121 902 ntBASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC6.8□□□□□ -1.32
Hoxd3P09027 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms