Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.4□□□□□ -1.22
CopeO89079 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.4□□□□□ -1.22
CopeO89079 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.4□□□□□ -1.22
CopeO89079 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.4□□□□□ -1.22
CopeO89079 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.4□□□□□ -1.22
CopeO89079 Gm17097-201ENSMUST00000166414 714 ntBASIC7.4□□□□□ -1.22
CopeO89079 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CopeO89079 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.4□□□□□ -1.22
CopeO89079 Gm28164-201ENSMUST00000190143 442 ntBASIC7.4□□□□□ -1.22
CopeO89079 Gm38078-201ENSMUST00000192771 392 ntBASIC7.4□□□□□ -1.22
CopeO89079 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.4□□□□□ -1.22
CopeO89079 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.4□□□□□ -1.22
CopeO89079 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.4□□□□□ -1.22
CopeO89079 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.4□□□□□ -1.22
CopeO89079 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.4□□□□□ -1.22
CopeO89079 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
CopeO89079 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC7.4□□□□□ -1.22
CopeO89079 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.4□□□□□ -1.22
CopeO89079 Gm9800-201ENSMUST00000052615 336 ntBASIC7.4□□□□□ -1.22
CopeO89079 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.4□□□□□ -1.22
CopeO89079 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
CopeO89079 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CopeO89079 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
CopeO89079 Gm45251-201ENSMUST00000209486 1465 ntBASIC7.4□□□□□ -1.22
CopeO89079 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.4□□□□□ -1.22
CopeO89079 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.4□□□□□ -1.23
CopeO89079 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CopeO89079 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CopeO89079 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CopeO89079 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CopeO89079 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CopeO89079 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CopeO89079 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CopeO89079 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CopeO89079 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Gm13521-201ENSMUST00000118922 866 ntBASIC7.39□□□□□ -1.23
CopeO89079 Gm15481-201ENSMUST00000120264 539 ntBASIC7.39□□□□□ -1.23
CopeO89079 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.39□□□□□ -1.23
CopeO89079 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CopeO89079 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Gm36935-201ENSMUST00000192526 292 ntBASIC7.39□□□□□ -1.23
CopeO89079 Gm18752-201ENSMUST00000192876 608 ntBASIC7.39□□□□□ -1.23
CopeO89079 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.39□□□□□ -1.23
CopeO89079 AC163638.1-201ENSMUST00000224818 392 ntBASIC7.39□□□□□ -1.23
CopeO89079 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CopeO89079 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CopeO89079 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CopeO89079 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.39□□□□□ -1.23
CopeO89079 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CopeO89079 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CopeO89079 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CopeO89079 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Ighv1-67-201ENSMUST00000103538 294 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm13137-201ENSMUST00000118035 345 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm1947-201ENSMUST00000122451 910 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.38□□□□□ -1.23
CopeO89079 Gm7031-201ENSMUST00000173709 919 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm7426-201ENSMUST00000179046 404 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC7.38□□□□□ -1.23
CopeO89079 Gm37328-201ENSMUST00000193191 640 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm23011-202ENSMUST00000197855 275 ntBASIC7.38□□□□□ -1.23
CopeO89079 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.38□□□□□ -1.23
CopeO89079 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.38□□□□□ -1.23
CopeO89079 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CopeO89079 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms