Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm12346-201ENSMUST00000121455 2255 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm8312-201ENSMUST00000119380 618 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm26729-201ENSMUST00000180744 352 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 AC117240.1-201ENSMUST00000199436 61 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 AC126554.3-201ENSMUST00000223131 493 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 AC116596.2-203ENSMUST00000227345 731 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc180J3QNE4 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc180J3QNE4 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc180J3QNE4 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc180J3QNE4 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc180J3QNE4 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm4373-201ENSMUST00000178571 556 ntBASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Gm30517-201ENSMUST00000197350 772 ntBASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc180J3QNE4 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm13196-201ENSMUST00000118297 379 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 BC064078-201ENSMUST00000122939 570 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm7867-201ENSMUST00000189856 546 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm2860-201ENSMUST00000199226 707 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm7413-201ENSMUST00000219498 462 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 AC154380.1-201ENSMUST00000226804 720 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Gm37403-201ENSMUST00000193775 3521 ntBASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc180J3QNE4 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Gm13352-201ENSMUST00000117515 262 ntBASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Gm4886-201ENSMUST00000121874 1176 ntBASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc180J3QNE4 AC164978.1-201ENSMUST00000228608 4011 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm13237-201ENSMUST00000122151 635 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm2840-201ENSMUST00000048361 411 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms