Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm13352-201ENSMUST00000117515 262 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm25556-201ENSMUST00000158077 144 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm9672-201ENSMUST00000166437 425 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm43377-201ENSMUST00000201640 455 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.12
Scn3aA2ASI5 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Scn3aA2ASI5 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Scn3aA2ASI5 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Scn3aA2ASI5 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm24545-201ENSMUST00000158651 85 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm27018-201ENSMUST00000181136 225 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm7867-201ENSMUST00000189856 546 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm18955-201ENSMUST00000223173 649 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm24924-201ENSMUST00000084007 164 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Scn3aA2ASI5 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm16248-201ENSMUST00000124238 243 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm2975-201ENSMUST00000209710 820 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Scn3aA2ASI5 Gm13237-201ENSMUST00000122151 635 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms