Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Mir688-201ENSMUST00000102055 75 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm22152-201ENSMUST00000116966 125 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm5228-201ENSMUST00000117186 357 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm13163-201ENSMUST00000119875 336 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm15501-202ENSMUST00000140687 625 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm8046-201ENSMUST00000172151 616 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm29355-201ENSMUST00000188178 697 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm28953-201ENSMUST00000188336 697 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm20788-201ENSMUST00000190538 697 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm37395-201ENSMUST00000194721 697 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm38328-201ENSMUST00000195582 317 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm18484-201ENSMUST00000204389 991 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm9249-201ENSMUST00000221420 578 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr890-201ENSMUST00000079804 945 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim3Q9R1R2 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm11383-201ENSMUST00000121346 807 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm27019-201ENSMUST00000183056 404 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm42424-201ENSMUST00000198319 376 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim3Q9R1R2 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.93□□□□□ -1.3
Trim3Q9R1R2 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms