Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm28728-201ENSMUST00000189087 405 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm38177-201ENSMUST00000192213 1040 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm37708-201ENSMUST00000192337 895 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm37073-201ENSMUST00000192469 1222 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm7542-201ENSMUST00000201140 777 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 AC116589.9-201ENSMUST00000221462 908 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm5316-201ENSMUST00000050391 270 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm26203-201ENSMUST00000082911 114 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Mir135b-201ENSMUST00000083501 97 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Npr3-204ENSMUST00000228489 1969 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.13□□□□□ -1.27
Clrn1Q8K445 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clrn1Q8K445 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC153959.1-201ENSMUST00000213617 1694 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm22660-201ENSMUST00000104193 130 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm12123-201ENSMUST00000120348 472 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm12124-201ENSMUST00000120504 679 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm12998-201ENSMUST00000122445 789 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm3025-201ENSMUST00000163454 489 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm3077-201ENSMUST00000165903 627 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm2878-201ENSMUST00000170173 486 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm22408-201ENSMUST00000174925 65 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm4891-201ENSMUST00000182279 912 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm28239-201ENSMUST00000190225 447 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm38203-201ENSMUST00000191815 245 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm37932-201ENSMUST00000192258 1167 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm38330-201ENSMUST00000192743 959 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm18529-201ENSMUST00000193025 1257 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm42424-201ENSMUST00000198319 376 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm43478-201ENSMUST00000200381 292 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm44615-201ENSMUST00000206548 358 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.12□□□□□ -1.27
Clrn1Q8K445 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms